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Peer-reviewed articles

  • Thibaudeau A, Schmitt K, François L, Chatrousse L, Hoffmann D, Cousin L, Weiss A, Vuidel A, Jacob CB, Sommer P, Benchoua A, Wilbertz JH. Pharmacological modulation of developmental and synaptic phenotypes in human SHANK3 deficient stem cell-derived neuronal models. Transl Psychiatry. 2024 Jun 10;14(1):249. doi: 10.1038/s41398-024-02947-3. PMID: 38858349.

  • Hovhannisyan Y, Li Z, Callon D, Suspène R, Batoumeni V, Canette A, Blanc J, Hocini H, Lefebvre C, El-Jahrani N, Kitsara M, L’honoré A, Kordeli E, Fornes P, Concordet JP, Tachdjian G, Rodriguez AM, Vartanian JP, Béhin A, Wahbi K, Joanne P, Agbulut O. Critical contribution of mitochondria in the development of cardiomyopathy linked to desmin mutation. Stem Cell Res Ther. 2024 Jan 2;15(1):10. doi: 10.1186/s13287-023-03619-7. PMID: 38167524; PMCID: PMC10763022.
  • Di Credico A, Weiss A, Corsini M, Gaggi G, Ghinassi B, Wilbertz JH, Di Baldassarre A. Machine learning identifies phenotypic profile alterations of human dopaminergic neurons exposed to bisphenols and perfluoroalkyls. Sci Rep. 2023 Dec 11;13(1):21907. doi: 10.1038/s41598-023-49364-y. PMID: 38081991; PMCID: PMC10713827.
  • Chatrousse L, Poullion T, El-Kassar L, Giraud-Triboult K, Boissart C, Sanatine P, Sommer P, Benchoua A. Establishment of heterozygous and homozygous SHANK3 knockout clonal pluripotent stem cells from the parental hESC line SA001 using CRISPR/Cas9. Stem Cell Res. 2023 Oct;72:103209. doi: 10.1016/j.scr.2023.103209. Epub 2023 Sep 22. PMID: 37769384.
  • Schumann G, Andreassen OA, Banaschewski T, Calhoun VD, Clinton N, Desrivieres S, Brandlistuen RE, Feng J, Hese S, Hitchen E, Hoffmann P, Jia T, Jirsa V, Marquand AF, Nees F, Nöthen MM, Novarino G, Polemiti E, Ralser M, Rapp M, Schepanski K, Schikowski T, Slater M, Sommer P, Stahl BC, Thompson PM, Twardziok S, van der Meer D, Walter H, Westlye L; environMENTAL Consortium. Addressing Global Environmental Challenges to Mental Health Using Population Neuroscience: A Review. JAMA Psychiatry. 2023 Oct 1;80(10):1066-1074. doi: 10.1001/jamapsychiatry.2023.2996. PMID: 37610741.
  • Lamiable A, Champetier T, Leonardi F, Cohen E, Sommer P, Hardy D, Argy N, Massougbodji A, Del Nery E, Cottrell G, Kwon YJ, Genovesio A. Revealing invisible cell phenotypes with conditional generative modeling. Nat Commun. 2023 Oct 11;14(1):6386. doi: 10.1038/s41467-023-42124-6. PMID: 37821450; PMCID: PMC10567685.
  • de Thonel A, Ahlskog JK, Daupin K, Dubreuil V, Berthelet J, Chaput C, Pires G, Leonetti C, Abane R, Barris LC, Leray I, Aalto AL, Naceri S, Cordonnier M, Benasolo C, Sanial M, Duchateau A, Vihervaara A, Puustinen MC, Miozzo F, Fergelot P, Lebigot É, Verloes A, Gressens P, Lacombe D, Gobbo J, Garrido C, Westerheide SD, David L, Petitjean M, Taboureau O, Rodrigues-Lima F, Passemard S, Sabéran-Djoneidi D, Nguyen L, Lancaster M, Sistonen L, Mezger V. Author Correction: CBP-HSF2 structural and functional interplay in Rubinstein-Taybi neurodevelopmental disorder. Nat Commun. 2023 Sep 28;14(1):6067. doi: 10.1038/s41467-023-41869-4. Erratum for: Nat Commun. 2022 Nov 16;13(1):7002. PMID: 37770591; PMCID: PMC10539333. doi: 10.1038/s41467-022-34476-2.
  • Weiss A, Sommer P, Wilbertz JH. Phenotypic Profiling of Human Stem Cell-Derived Midbrain Dopaminergic Neurons. J Vis Exp. 2023 Jul 7;(197). doi: 10.3791/65570. PMID: 37486112.
  • Xu J, Liu N, Polemiti E, Garcia-Mondragon L, Tang J, Liu X, Lett T, Yu L, Nöthen MM, Feng J, Yu C, Marquand A, Schumann G; the environMENTAL Consortium. Effects of urban living environments on mental health in adults. Nat Med. 2023 Jun;29(6):1456-1467. doi: 10.1038/s41591-023-02365-w. Epub 2023 Jun 15. PMID: 37322117; PMCID: PMC10287556.
  • Kim H, El-Khoury V, Schulte N, Zhan T, Betge J, Cousin L, Felli E, Pessaux P, Ogier A, Opitz O, Ku B, Ebert MP, Kwon YJ. Personalized functional profiling using ex-vivo patient-derived spheroids points out the potential of an antiangiogenic treatment in a patient with a metastatic lung atypical carcinoid. Cancer Biol Ther. 2022 Dec 31;23(1):96-102. doi: 10.1080/15384047.2021.2021042. PMID: 35193475; PMCID: PMC8890433.
  • Vuidel A, Cousin L, Weykopf B, Haupt S, Hanifehlou Z, Wiest-Daesslé N, Segschneider M, Lee J, Kwon YJ, Peitz M, Ogier A, Brino L, Brüstle O, Sommer P, Wilbertz JH. High-content phenotyping of Parkinson’s disease patient stem cell-derived midbrain dopaminergic neurons using machine learning classification. Stem Cell Reports. 2022 Sep 12:S2213-6711(22)00423-4. doi: 10.1016/j.stemcr.2022.09.001. Epub ahead of print. PMID: 36179692.
  • Ratliff M, Kim H, Qi H, Kim M, Ku B, Azorin DD, Hausmann D, Khajuria RK, Patel A, Maier E, Cousin L, Ogier A, Sahm F, Etminan N, Bunse L, Winkler F, El-Khoury V, Platten M, Kwon YJ. Patient-Derived Tumor Organoids for Guidance of Personalized Drug Therapies in Recurrent Glioblastoma. Int J Mol Sci. 2022 Jun 12;23(12):6572. doi: 10.3390/ijms23126572. PMID: 35743016; PMCID: PMC9223608.

    Preprint articles

    • Thibaudeau, Amandine et al., “Pharmacological modulation of developmental and synaptic phenotypes in human SHANK3 deficient stem cell-derived neuronal models” bioRxiv 2023.09.13.557523; doi: 2023.09.13.557523
    • Chandrasekaran, Srinivas Niranj et al., “ JUMP Cell Painting dataset: morphological impact of 136,000 chemical and genetic perturbations” bioRxiv 2023.03.23.534023; doi: 2023.03.23.534023